biology

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Anoop Arunagiri		ACCESS ACCESS-account ACCESS-allocations ACCESS-credits allocations-proposal biology biophysics physiology more...	biology biophysics physiology structural-biology
Alyssa Pivirotto	ACCESS CSSN, Campus Champions	bash bioinformatics biology conda data-analysis data-science genomics github more...	arcgis machine-learning
Cindy Cheng	Campus Champions	abstract affiliations ai archiving artificial-intelligence azure backup benchmarking more...
Carolina Roe-Raymond	CCMNet	anaconda arcgis big-data biology conda css data data-analysis more...	big-data image-processing paraview visIt
David Carlson	ACCESS CSSN, Open OnDemand	bash bioinformatics biology gatk genomics ookami python r more...	ACCESS bash bioinformatics containers genomics
diana Trotman	CAREERS	benchmarking biology cloud-open-source cloudlab community-outreach computational-chemistry cybersecurity data-analysis more...	benchmarking bioinformatics biology cleanup cloud-commercial computational-chemistry containers cybersecurity more...
Daniel Morales	Campus Champions	ACCESS ACCESS-allocations ACCESS-credits adding-users allocation-management anaconda bash batch-jobs more...	ACCESS ACCESS-allocations allocation-management bioinformatics biology community-outreach conda deep-learning more...
Deborah Penchoff	Campus Champions	abstract ACCESS ACCESS-account adding-users affiliations ai allocation-management allocation-time more...
Diana Toups Dugas	Campus Champions	bioinformatics biology genomics proposal-development research-facilitation software-carpentry training workforce-development
Elie Alhajjar	ACCESS CSSN, CCMNet	biology c++ community-outreach data-science julia mathematica matlab professional-development more...	ai big-data biology c++ community-outreach data-analysis data-science deep-learning more...
Feseha Abebe-Akele	CCMNet	abstract ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website adding-users affiliations more...	ACES administering-hpc ai artificial-intelligence aws azure bash batch-jobs more...
Jeremiah Olugbami		abstract affiliations bioinformatics biology chemistry citation genomics hardware more...
Jeffrey Weekley	Campus Champions	administering-hpc archiving biology community-outreach condo containers cybersecurity data-compliance more...
Amy Koshoffer	Campus Champions	biology data-lifecycle data-management doi file-formats workflow	archiving backup biology data-lifecycle data-management doi file-formats file-transfer more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Maureen Donlin	Great Plains, Open OnDemand	bioinformatics biology research-facilitation research-grants	ACCESS-allocations administering-hpc cluster-support cui docker federated-authentication jetstream management more...
Nicholas Danes	Campus Champions, MINES	anaconda biology compiling cpu-bound distributed-computing fluid-dynamics fortran job-array more...	ai aws azure benchmarking big-data c c++ deep-learning more...
Nicholas Panchy	Campus Champions	bash bioinformatics biology conda easybuild genomics modules open-ondemand more...
Renée F. Brown	ACCESS CSSN	bash big-data biology computer-science data data-analysis data-lifecycle data-management more...
Rob Harbert	Northeast	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics gis more...
Xiaoqin Huang	ACCESS CSSN	ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...	ACCESS-credits ACCESS-website adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...
Tessa Fisher		astronomy astronomy and planetary sciences atmospheric-physics biology earth-sciences linux python slurm	astronomy and planetary sciences atmospheric-physics biology earth-sciences hpc linux machine-learning python more...
Thomas Pranzatelli		bash batch-jobs bioinformatics biology c c++ cloud-computing cluster-management more...	bash biology cuda deep-learning distributed-computing gpu IO-issue julia more...
Vijay Shankar	Campus Champions	administering-hpc archiving backup bash big-data bioinformatics biology centos more...	ACCESS ansible aws azure campus-champions cgroups cifs cloud more...
Wesley Brashear	ACCESS CSSN, Campus Champions	bioinformatics biology genomics python r
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...

Users

Name	Roles	Skills	Interests
Matt Ferguson	researcher/educator	ACCESS ai anaconda bash bioinformatics biology c charmm more...	ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website ai amber anaconda more...
Maureen Donlin	researcher/educator rcf	bioinformatics biology research-facilitation research-grants	ACCESS-allocations administering-hpc cluster-support cui docker federated-authentication jetstream management more...

Projects

There are no projects associated with this topic. Please check back often as more projects are added regularly, or view All Projects.

Blog Entries

There are no Blog Entries associated with this topic.

Organizations

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ERN

Website

https://www.ernrp.org

big-data data-access-protocols data-compliance data-management data-analysis

Affinity Groups

There are no Affinity Groups associated with this topic. View All Affinity Groups.

Announcements

Title	Date
Register for HTC25: Connect with the High Throughput Computing Community	03/18/25
Ookami Webinar	02/14/24
Open Call: Minisymposia for PASC24	10/05/23

Upcoming Events & Trainings

No events or trainings are currently scheduled.

Topics from Ask.CI

Knowledge Base Resources

Title	Category	Tags	Skill Level
Data Analysis with R for Educators	Video	data-analysis, data-science, psychology, biology, training, workforce-development, r	Beginner
phenoACCESS-24 workshop program materials	Website	big-data, data-management, metadata, biology, professional-development, workforce-development	Intermediate
Trinity Tutorial for Transcriptome Assembly	Learning	biology	Beginner

People with Expertise

Maureen Donlin

Programs

Great Plains, Open OnDemand

Roles

researcher/educator, research computing facilitator, OnDemand

Expertise

bioinformatics

biology

research-facilitation

research-grants

People with Interest

There are no people with this tag.