People

Chris Hemme

University of Rhode Island

Bioinformatics Core Director

Programs

CAREERS

Skills

big-data bioinformatics r data-analysis anaconda genomics biology

Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Skills

ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

Xiaoluo Jiao

Columbia University, Mailman School of Public Health

Programs

CAREERS

Skills

sas data-wrangling data-management data-reproducibility biology bioinformatics genomics machine-learning psychology git github programming cleanup r

Masoud Keramati

Northeastern University

Programs

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Skills

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Christina Koch

University of Wisconsin-Madison

Programs

ACCESS CSSN

Skills

open-science-grid job-submission bash git containers docker singularity

Amy Koshoffer

University of Cincinnati-Main Campus

Programs

Campus Champions

Skills

data-management data-lifecycle workflow doi file-formats biology

yaniv kovalski

Stonehill College

Programs

Northeast

Skills

biology github modules r

shuai liu

University of Arkansas

Programs

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Skills

Angelo Lucia

University of Rhode Island

Programs

Skills

monte-carlo biology computational-chemistry fortran matlab

Tom Maiden

Pittsburgh Supercomputing Center

Programs

ACCESS CSSN

Skills

batch-jobs core-hours job-accounting job-submission pbs pending-jobs resources schedulers scheduling slurm training workforce-development xsede tickets login password ACCESS-website bridges-2

Lenore Martin

University of Rhoide Island

Tenured Associate Professor

Programs

CAREERS

Skills

Vinayak Mathur

Cabrini University

Assistant Professor

Programs

CAREERS

Skills

bioinformatics genomics biology

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Alison McClellan

Stanford University

Programs

ACCESS CSSN

Skills

r python project-management research-facilitation research-grants biology computational-chemistry genomics

Aidan McCrillis

University of Rhode Island

Programs

CAREERS

Skills

bioinformatics data-science biology python

Daniel Morales

Florida International University

Programs

Campus Champions

Skills

Sami Muslmani

University of Arizona

Programs

ACCESS CSSN

Skills

biology physiology abstract citation community-outreach publication-database research-facilitation

Morgan Newton

Santa Monica College

Programs

ACCESS CSSN

Skills

file-transfer archiving backup slurm job-failure job-sizing job-submission bash permissions os ssh professional-development project-management management anaconda c c++java programming openmpi python jupyterhub

Od Odbadrakh

University of Tennessee, Knoxville

Computational Scientist

Programs

ACCESS CSSN

Skills

Nicholas Panchy

Michigan State University

Programs

Campus Champions

Skills

biology genomics open-ondemand slurm bash modules conda python r easybuild bioinformatics

Deborah Penchoff

University of Tennessee - Knoxville

Programs

Campus Champions

Skills

ai deep-learning machine-learning neural-networks reinforcement-learning supervised-learning unsupervised-learning big-data computer-graphics data-analysis dft plotting visualization data-management data-sharing github github-pages benchmarking checkpoint cpu-bound memory parallelization performance-tuning scaling fluid-dynamics gaussian molecular-dynamics openfoam pytorch tensorflow cluster cluster-management cpu-architecture distributed-computing gpu hardware hpc-cluster-architecture hpc-operations lustre networking nvidia unix-environment bash environment-modules git ssh vim vm ACCESS ACCESS-account adding-users allocation-management allocation-time allocation-users anvil bridges-2 stampede2 stampede3 abstract affiliations citation community-outreach management mentorship professional-development project-management proposal-development publication-database research-facilitation research-grants training workforce-development xsede c++fortran jupyterhub mathematica matlab mpi openmp openmpi programming python r spark batch-jobs core-hours job-accounting job-submission pbs slurm biology computational-chemistry data-science quantum-mechanics data-compliance duo vpn spack version-control profile proposal-request

Alyssa Pivirotto

Bryn Mawr College

Programs

ACCESS CSSN, Campus Champions

Skills

data-analysis github bash conda python r bioinformatics biology data-science genomics

Michael Puerrer

University of Rhode Island

Programs

Campus Champions, Northeast

Skills

People

Skills

Organization

Program